BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002F07SP1|AL425000
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1283 1954 0.0
>3x_Contig1283
Length = 6261
Score = 1954 bits (981), Expect = 0.0
Identities = 995/1003 (99%), Gaps = 1/1003 (0%)
Strand = Plus / Plus
Query: 1 gatcctaatatcagatacagcgctttacaatgtatgttcaattcgacgtacttcactgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gatcctaatatcagatacagcgctttacaatgtatgttcaattcgacgtacttcactgat 747
Query: 61 atcgtcagcaacaccgggtcggactcaaacctttcgttgatcgattctttaccattgcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 atcgtcagcaacaccgggtcggactcaaacctttcgttgatcgattctttaccattgcta 807
Query: 121 cattttgaggaaagtgaattacaagggttgtcatctaacgatatatatagattgactggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 cattttgaggaaagtgaattacaagggttgtcatctaacgatatatatagattgactggc 867
Query: 181 aaactgatatagaaccgacaagacaaaaggaaaactaaaaacaaaaaaaaagactagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 aaactgatatagaaccgacaagacaaaaggaaaactaaaaacaaaaaaaaagactagttg 927
Query: 241 agagaaggaaatatgcaaatacaaatgcattaatgtaacgttctacccagcacatccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 agagaaggaaatatgcaaatacaaatgcattaatgtaacgttctacccagcacatccaaa 987
Query: 301 gaaaatgaaattaatacacgawattwatgtgcatacmaatagttacttctcatatgccta 360
||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||
Sbjct: 988 gaaaatgaaattaatacacgaaattaatgtgcatacaaatagttacttctcatatgccta 1047
Query: 361 cttgttgcaggcaacaccgttgttcaatgctatcctacgctccccccctttgcatatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 cttgttgcaggcaacaccgttgttcaatgctatcctacgctccccccctttgcatatcat 1107
Query: 421 atttctcttcaattttaaagttcatttcaatgtctttcggaaaacctatagttctatcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 atttctcttcaattttaaagttcatttcaatgtctttcggaaaacctatagttctatcct 1167
Query: 481 gtccctaatagtgttcatattgggcagtggattctttttatttatgttaagcmttcccta 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1168 gtccctaatagtgttcatattgggcagtggattctttttatttatgttaagcattcccta 1227
Query: 541 ttcctcactaggaaaagggcacttggacatcataattcttccttttatagcaatactttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 ttcctcactaggaaaagggcacttggacatcataattcttccttttatagcaatactttt 1287
Query: 601 ctttctagcttccgtcctacctttttcataccggatttcaccttgtcagttcataataat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 ctttctagcttccgtcctacctttttcataccggatttcaccttgtcagttcataataat 1347
Query: 661 atcaatactcacctattaagagccacatgacgtgcgtkcgattgagtacttaaaaactac 720
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1348 atcaatactcacctattaagagccacatgacgtgcgtgcgattgagtacttaaaaactac 1407
Query: 721 tgttaccttttgtccatcgtgtaactttgcattttctttgtcacattttcctgtacaaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1408 tgttaccttttgtccatcgtgtaactttgcattttctttgtcacattttcctgtacaaga 1467
Query: 781 actaacttgacaaaattgattttccttgaagagaagtcgaattaaaagtttaacaggaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1468 actaacttgacaaaattgattttccttgaagagaagtcgaattaaaagtttaacaggaat 1527
Query: 841 atactgggacggacaaaaagatggaaaccaagaccctgatacactcaggggctgctaagg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1528 atactgggacggacaaaaagatggaaaccaagaccctgatacactcaggggctgctaagg 1587
Query: 901 agatgagctatactgagaggtataatgtcgc-mcgctaatacctttgcctgagtatcttt 959
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1588 agatgagctatactgagaggtataatgtcgcaccgctaatacctttgcctgagtatcttt 1647
Query: 960 ttcatagattatttcagctcaamtgccgtactgtgtttggagt 1002
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1648 ttcatagattatttcagctcaactgccgtactgtgtttggagt 1690
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8855
Number of Sequences: 1807
Number of extensions: 8855
Number of successful extensions: 104
Number of sequences better than 1.0e-20: 1
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)